Stem-loop bma-mir-36a-3

Accession

MI0029191

Description

Brugia malayi bma-mir-36a-3 precursor miRNA

Literature search

1 open access papers mention bma-mir-36a-3
(9 sentences)

Sequence

33088 reads, 1492.0 reads per million, 23 experiments

auggugcuuCAGGAUGUGCAUCGUGGUUGAUGuaguuaaaaauucucucaUCACCGGGUGCACAUUCGGUCauaccaucaugcuauauucaa
((((((.....(((((((((((.((((.((((.((...........))))))))))))))))))))).....))))))..............

Structure

--------------      cuuCA           G    U    u  uuaa 
              auggug     GGAUGUGCAUC UGGU GAUG ag    a
              ||||||     ||||||||||| |||| |||| ||    a
              uaccau     CUUACACGUGG GCCA CUac uc    a
aacuuauaucguac      aCUGG           -    -    -  ucuu 

Annotation confidence High

Genome context

Bmal_v3_scaffold337: 13509-13600 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bma-mir-36a-3

Mature bma-miR-36a-5p

• Accession: MIMAT0057246
• Description: Brugia malayi bma-miR-36a-5p mature miRNA
• Sequence: 10 - CAGGAUGUGCAUCGUGGUUGAUG - 32
• Evidence: experimental ; Illumina [2]

Mature bma-miR-36a-3-3p

• Accession: MIMAT0037491
• Description: Brugia malayi bma-miR-36a-3-3p mature miRNA
• Sequence: 51 - UCACCGGGUGCACAUUCGGUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498