Stem-loop bdi-MIR169l

Accession

MI0029157

Description

Brachypodium distachyon bdi-MIR169l precursor miRNA

Literature search

3 open access papers mention bdi-MIR169l
(27 sentences)

Sequence

augUAGCCAAGGAUGAAUUGCCGGccggcguuugucgaugguacucagccggagaucgcgcgauugagccggcaagucauuuguggcuacgu
(((((((((.((((((.((((((((((((((..(((..((((.....))))..))).))))...)).)))))))).)))))).)))))))))

Structure

         A      A        -  ---    uu   ga    a 
augUAGCCA GGAUGA UUGCCGGc cg   gcgu  guc  uggu c
||||||||| |||||| |||||||| ||   ||||  |||  |||| u
ugcaucggu uuuacu aacggccg gu   cgcg  uag  gccg c
         g      g        a  uag    -c   ag    a 

Annotation confidence Not enough data

Genome context

4: 35762160-35762251 [-]

Mature bdi-miR169l

• Accession: MIMAT0035515
• Description: Brachypodium distachyon bdi-miR169l mature miRNA
• Sequence: 4 - UAGCCAAGGAUGAAUUGCCGG - 24
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145