miRBase entry: nve-mir-9440-4

Stem-loop nve-mir-9440-4


Accession
MI0029057
Description
Nematostella vectensis nve-mir-9440-4 precursor miRNA
Gene family
MIPF0001915; mir-9440


Sequence

327 reads, 3564 reads per million, 20 experiments
UAAUCAACGAGAGUGUCAACCUGccgcgaaggucuaugaguggucuguugcuccucuuuguugagcca
...((((((((((.(.((((..(((((..(......)..)))))..)))))..))).)))))))....

Structure
-UAA       -   -U U    CU     ga gg 
    UCAACGA GAG  G CAAC  Gccgc  a  u
    ||||||| |||  | ||||  |||||  |   
    aguuguu cuc  c guug  uggug  u  c
accg       u   cu -    uc     ag au 


Annotation confidence Not enough data
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Genome context
scaffold_1910: 1185-1252 [+]

Database links

Mature nve-miR-9440

Accession MIMAT0035401
Description Nematostella vectensis nve-miR-9440 mature miRNA
Sequence 1 - UAAUCAACGAGAGUGUCAACCUG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663