Stem-loop gsa-mir-9402

Accession

MI0028995

Description

Gyrodactylus salaris gsa-mir-9402 precursor miRNA

Sequence

GUGAAAGAGGUUUGGAUUGAAAuaagggucuuuaugauucgauuacauuUCAUUUCUAACCUCUUUGCAAUU
((.(((((((((.(((.((((((..(((((.....)))))......)))))).))).)))))))))))....

Structure

----  G         U   U      ----aa     u 
    GU AAAGAGGUU GGA UGAAAu      ggguc u
    || ||||||||| ||| ||||||      ||||| u
    CG UUUCUCCAA CUU ACUuua      cuuag a
UUAA  -         U   U      cauuag     u 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9402-5p

• Accession: MIMAT0035352
• Description: Gyrodactylus salaris gsa-miR-9402-5p mature miRNA
• Sequence: 1 - GUGAAAGAGGUUUGGAUUGAAA - 22
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9402-3p

• Accession: MIMAT0035353
• Description: Gyrodactylus salaris gsa-miR-9402-3p mature miRNA
• Sequence: 50 - UCAUUUCUAACCUCUUUGCAAUU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628