Stem-loop gsa-mir-9394b

Accession

MI0028993

Description

Gyrodactylus salaris gsa-mir-9394b precursor miRNA

Sequence

AGAGGAAUCUGGAUCAGUGGCauuggcuugccaauauucuugUCGCGAGUUCGAUUCCUCCCUA
.((((((((.((((..((((((((((....))))......))))))..))))))))))))....

Structure

---A        U    CA      ------    c 
    GAGGAAUC GGAU  GUGGCa      uugg u
    |||||||| ||||  ||||||      ||||  
    CUCCUUAG CUUG  CGCUgu      aacc u
AUCC        -    AG      ucuuau    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9394b-5p

• Accession: MIMAT0035348
• Description: Gyrodactylus salaris gsa-miR-9394b-5p mature miRNA
• Sequence: 1 - AGAGGAAUCUGGAUCAGUGGC - 21
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9394b-3p

• Accession: MIMAT0035349
• Description: Gyrodactylus salaris gsa-miR-9394b-3p mature miRNA
• Sequence: 43 - UCGCGAGUUCGAUUCCUCCCUA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628