Stem-loop gsa-mir-9400

Accession

MI0028992

Description

Gyrodactylus salaris gsa-mir-9400 precursor miRNA

Sequence

UAGACAAGAAGAAUGAAAGAUuucaccagccaucaaaugccugucaaauCAUUCAUUUCUUUUGUUU
.((((((((.(((((((.(((((.((..((........))..)).))))).))))))).))))))))

Structure

U        A       A     c  ca  cau 
 AGACAAGA GAAUGAA GAUuu ac  gc   c
 |||||||| ||||||| ||||| ||  ||    
 UUUGUUUU UUUACUU Cuaaa ug  cg   a
-        C       A     c  uc  uaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9400-5p

• Accession: MIMAT0035346
• Description: Gyrodactylus salaris gsa-miR-9400-5p mature miRNA
• Sequence: 1 - UAGACAAGAAGAAUGAAAGAU - 21
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9400-3p

• Accession: MIMAT0035347
• Description: Gyrodactylus salaris gsa-miR-9400-3p mature miRNA
• Sequence: 50 - CAUUCAUUUCUUUUGUUU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628