Stem-loop gsa-mir-9399

Accession

MI0028991

Description

Gyrodactylus salaris gsa-mir-9399 precursor miRNA

Sequence

CCAAUUUCUGUCCACUACAuggugaaugugaucuagacucuguuuuuaaauaaagguuggaggcuggcacauuuguuuugUGGUGUACAGAUUAAAAAGG
......(((((.(((((((.((((((((((..((((.(((((.((((.....)))).))))).)))))))))))))).))))))).))))).........

Structure

---CCAAUU     C       u          au    a     u    a 
         UCUGU CACUACA ggugaaugug  cuag cucug uuuu a
         ||||| ||||||| ||||||||||  |||| ||||| |||| a
         AGACA GUGGUgu uuguuuacac  gguc gaggu ggaa u
GGAAAAAUU     U       u          --    g     u    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9399-5p

• Accession: MIMAT0035344
• Description: Gyrodactylus salaris gsa-miR-9399-5p mature miRNA
• Sequence: 1 - CCAAUUUCUGUCCACUACA - 19
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9399-3p

• Accession: MIMAT0035345
• Description: Gyrodactylus salaris gsa-miR-9399-3p mature miRNA
• Sequence: 81 - UGGUGUACAGAUUAAAAAGG - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628