Stem-loop gsa-mir-9398

Accession

MI0028990

Description

Gyrodactylus salaris gsa-mir-9398 precursor miRNA

Sequence

AAAGUAAUCUUUAAUCUGAUUgguuuucaucgaaaugaagaauauccaAUUAGAUUGGAGAUGGCUUCUU
.((((.((((((((((((((((((((((((....)))))))....))))))))))))))))).))))...

Structure

--A    A                 ----       c 
   AAGU AUCUUUAAUCUGAUUgg    uuuucau g
   |||| |||||||||||||||||    |||||||  
   UUCG UAGAGGUUAGAUUAacc    agaagua a
UUC    G                 uaua       a 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9398-5p

• Accession: MIMAT0035342
• Description: Gyrodactylus salaris gsa-miR-9398-5p mature miRNA
• Sequence: 1 - AAAGUAAUCUUUAAUCUGAUU - 21
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9398-3p

• Accession: MIMAT0035343
• Description: Gyrodactylus salaris gsa-miR-9398-3p mature miRNA
• Sequence: 49 - AUUAGAUUGGAGAUGGCUUCUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628