Stem-loop gsa-mir-9396

Accession

MI0028988

Description

Gyrodactylus salaris gsa-mir-9396 precursor miRNA

Sequence

GUAAGUGAUGAAGAAAUAUAAUuggaaauuuuaauUCUAAUUUCUCGUCCCUUUACAG
(((((.(((((.(((((..(((((((...)))))))...)))))))))).).))))..

Structure

--    - U     A     -AU       a 
  GUAA G GAUGA GAAAU   AAUugga  
  |||| | ||||| |||||   ||||||| a
  CAUU C CUGCU CUUUA   Uuaauuu  
GA    U C     -     AUC       u 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9396-5p

• Accession: MIMAT0035338
• Description: Gyrodactylus salaris gsa-miR-9396-5p mature miRNA
• Sequence: 1 - GUAAGUGAUGAAGAAAUAUAAU - 22
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9396-3p

• Accession: MIMAT0035339
• Description: Gyrodactylus salaris gsa-miR-9396-3p mature miRNA
• Sequence: 36 - UCUAAUUUCUCGUCCCUUUACAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628