Stem-loop gsa-mir-9390

Accession

MI0028980

Description

Gyrodactylus salaris gsa-mir-9390 precursor miRNA

Sequence

UGCGGUAUACUGAUGAGUCCcacgagaACGAAACGCGUCUAUACCUGGU
...((((((..((((.((..(........)..)).))))))))))....

Structure

-UGC      CU    A  CC acg 
    GGUAUA  GAUG GU  c   a
    ||||||  |||| ||  |    
    CCAUAU  CUGC CA  G   g
UGGU      --    G  AA CAa 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9390-5p

• Accession: MIMAT0035322
• Description: Gyrodactylus salaris gsa-miR-9390-5p mature miRNA
• Sequence: 1 - UGCGGUAUACUGAUGAGUCC - 20
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9390-3p

• Accession: MIMAT0035323
• Description: Gyrodactylus salaris gsa-miR-9390-3p mature miRNA
• Sequence: 28 - ACGAAACGCGUCUAUACCUGGU - 49
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628