Stem-loop gsa-mir-9389

Accession

MI0028978

Description

Gyrodactylus salaris gsa-mir-9389 precursor miRNA

Sequence

CGGCGCUUUGAUUGUCCACACUGAaucaucucugcacauguuugcaacguucAGUGUGCACACAAGGUUCCAUA
.((.((((((..(((.((((((((((......((((......))))..)))))))))).))))))))).))...

Structure

--C  C      AU   C          caucuc    ca 
   GG GCUUUG  UGU CACACUGAau      ugca  u
   || ||||||  ||| ||||||||||      ||||   
   CC UGGAAC  ACA GUGUGAcuug      acgu  g
AUA  U      --   C          ----ca    uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-9389-5p

• Accession: MIMAT0035318
• Description: Gyrodactylus salaris gsa-miR-9389-5p mature miRNA
• Sequence: 1 - CGGCGCUUUGAUUGUCCACACUGA - 24
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9389-3p

• Accession: MIMAT0035319
• Description: Gyrodactylus salaris gsa-miR-9389-3p mature miRNA
• Sequence: 53 - AGUGUGCACACAAGGUUCCAUA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628