Stem-loop gsa-lin-4

Accession

MI0028972

Description

Gyrodactylus salaris gsa-lin-4 precursor miRNA

Sequence

ACCCUGAGUCAGAAAAACGUUUucgcauuuccuaaaagACGUUUUUUUCACUCAGGCAUA
..(((((((.(((((((((((((............))))))))))))).)))))))....

Structure

--AC       C             cgcau 
    CCUGAGU AGAAAAACGUUUu     u
    ||||||| |||||||||||||      
    GGACUCA UUUUUUUGCAgaa     u
AUAC       C             aaucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-lin-4-5p

• Accession: MIMAT0035306
• Description: Gyrodactylus salaris gsa-lin-4-5p mature miRNA
• Sequence: 1 - ACCCUGAGUCAGAAAAACGUUU - 22
• Evidence: experimental ; Illumina [1]

Mature gsa-lin-4-3p

• Accession: MIMAT0035307
• Description: Gyrodactylus salaris gsa-lin-4-3p mature miRNA
• Sequence: 39 - ACGUUUUUUUCACUCAGGCAUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628