Stem-loop gsa-mir-1993

Accession

MI0028969

Description

Gyrodactylus salaris gsa-mir-1993 precursor miRNA

Sequence

AGUGGAAAACUUGCAUAACUACAguuaaagauuauuauucuugUAUUAUGCAAUAUUUCACUCG
(((((((...((((((((.((((.....(((.......)))))))))))))))..)))))))..

Structure

--       AAC        C    guuaa   uu 
  AGUGGAA   UUGCAUAA UACA     aga  a
  |||||||   |||||||| ||||     |||  u
  UCACUUU   AACGUAUU AUgu     ucu  u
GC       -AU        -    -----   ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-1993-5p

• Accession: MIMAT0035300
• Description: Gyrodactylus salaris gsa-miR-1993-5p mature miRNA
• Sequence: 1 - AGUGGAAAACUUGCAUAACUACA - 23
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-1993-3p

• Accession: MIMAT0035301
• Description: Gyrodactylus salaris gsa-miR-1993-3p mature miRNA
• Sequence: 44 - UAUUAUGCAAUAUUUCACUCG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628