Stem-loop gsa-mir-278

Accession

MI0028966

Description

Gyrodactylus salaris gsa-mir-278 precursor miRNA

Sequence

ACAAGGGUCCUUCAACCGCUAAGUAcccaacauuugguaCUCGGUGGGAGUAUUUUUGUAC
((((((((.((((.((((...((((((........)))))))))).)))).))))))))..

Structure

--        C    A    CUA      caa 
  ACAAGGGU CUUC ACCG   AGUAcc   c
  |||||||| |||| ||||   ||||||    
  UGUUUUUA GAGG UGGC   UCaugg   a
CA        U    G    ---      uuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-278-5p

• Accession: MIMAT0035294
• Description: Gyrodactylus salaris gsa-miR-278-5p mature miRNA
• Sequence: 1 - ACAAGGGUCCUUCAACCGCUAAGUA - 25
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-278-3p

• Accession: MIMAT0035295
• Description: Gyrodactylus salaris gsa-miR-278-3p mature miRNA
• Sequence: 40 - CUCGGUGGGAGUAUUUUUGUAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628