Stem-loop gsa-mir-9

Accession

MI0028963

Description

Gyrodactylus salaris gsa-mir-9 precursor miRNA

Sequence

UCUUUGGUUUUCUUUAGCUGUGUGAuugcaauaaagacacuauuauaauuggaccucagcccaucuucaauagugaucAUAUCAGUUAGAAACUAAAGAAA
(((((((((((...((((((((((((...........(((((((.....(((........))).....))))))))))))).)))))))))))))))))..

Structure

--           CUU      -      ugcaauaaaga       auaau   acc 
  UCUUUGGUUUU   UAGCUG UGUGAu           cacuauu     ugg   u
  |||||||||||   |||||| ||||||           |||||||     |||    
  AGAAAUCAAAG   AUUGAC AUAcua           gugauaa     acc   c
AA           ---      U      -----------       cuucu   cga 

Annotation confidence Low

Genome context

Unknown

Mature gsa-miR-9-5p

• Accession: MIMAT0035288
• Description: Gyrodactylus salaris gsa-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUUUCUUUAGCUGUGUGA - 25
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-9-3p

• Accession: MIMAT0035289
• Description: Gyrodactylus salaris gsa-miR-9-3p mature miRNA
• Sequence: 79 - AUAUCAGUUAGAAACUAAAGAAA - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628