Stem-loop gsa-mir-7

Accession

MI0028960

Description

Gyrodactylus salaris gsa-mir-7 precursor miRNA

Sequence

UGGAAGACUUGUGAUUGAGUUGUUucgaacuauauacucccuauacgagaguaugaaCAACCAUCCAAUUCUUCCGAA
(((((((.(((.(((.(.(((((((........((((((.(.....).)))))))))))))))))))).)))))))..

Structure

--       C   U   U A       cgaacuau      c u 
  UGGAAGA UUG GAU G GUUGUUu        auacuc c a
  ||||||| ||| ||| | |||||||        |||||| | u
  GCCUUCU AAC CUA C CAACaag        uaugag g a
AA       U   -   - -       --------      a c 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-7-5p

• Accession: MIMAT0035282
• Description: Gyrodactylus salaris gsa-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUUGUGAUUGAGUUGUU - 24
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-7-3p

• Accession: MIMAT0035283
• Description: Gyrodactylus salaris gsa-miR-7-3p mature miRNA
• Sequence: 58 - CAACCAUCCAAUUCUUCCGAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628