Stem-loop gsa-mir-124a

Accession

MI0028956

Description

Gyrodactylus salaris gsa-mir-124a precursor miRNA

Sequence

GGUAUUUUCCACGAAGUCUUAGGaaguugaaaaauaaaauauuuaacuUAAGGCACGCGGUGAAUACC
(((((((.((.((..((((((...(((((((..........))))))))))))).)).)).)))))))

Structure

       U  A  AA      GGa       aaau 
GGUAUUU CC CG  GUCUUA   aguugaa    a
||||||| || ||  ||||||   |||||||     
CCAUAAG GG GC  CGGAAU   ucaauuu    a
       U  C  -A      ---       auaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-124a-5p

• Accession: MIMAT0035274
• Description: Gyrodactylus salaris gsa-miR-124a-5p mature miRNA
• Sequence: 1 - GGUAUUUUCCACGAAGUCUUAGG - 23
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-124a-3p

• Accession: MIMAT0035275
• Description: Gyrodactylus salaris gsa-miR-124a-3p mature miRNA
• Sequence: 49 - UAAGGCACGCGGUGAAUACC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628