Stem-loop gsa-mir-281

Accession

MI0028953

Description

Gyrodactylus salaris gsa-mir-281 precursor miRNA

Sequence

UGGAGGGCAAACUCUCUUGACGUAaagaccaagaaaucauuacaUGUCAUGGAGUUGCUCUUCAAA
((((((((((.((((..((((((((.((........)).))))..)))).))))))))))))))..

Structure

--          A    CU    --    a  cca 
  UGGAGGGCAA CUCU  UGAC  GUAa ga   a
  |||||||||| ||||  ||||  |||| ||    
  ACUUCUCGUU GAGG  ACUG  cauu cu   g
AA          -    -U    Ua    a  aaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-281-5p

• Accession: MIMAT0035268
• Description: Gyrodactylus salaris gsa-miR-281-5p mature miRNA
• Sequence: 1 - UGGAGGGCAAACUCUCUUGACGUA - 24
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-281-3p

• Accession: MIMAT0035269
• Description: Gyrodactylus salaris gsa-miR-281-3p mature miRNA
• Sequence: 45 - UGUCAUGGAGUUGCUCUUCAAA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628