Stem-loop gsa-mir-36

Accession

MI0028948

Description

Gyrodactylus salaris gsa-mir-36 precursor miRNA

Sequence

GGCUUGAUGUUUCUCCGGUagauggaaauuuuaaugaguaaaccuuuuucuaaaguucaaucucuaauuacaUCACCGGGUAGACAUUCAUCCAC
((...(((((((.((((((.((((..((((.....(((.....((((....))))......))).)))).)))))))))).)))))))...))..

Structure

--  CUU       C      a    ga    uuaau   -uaaac    u 
  GG   GAUGUUU UCCGGU gaug  aauu     gag      cuuu u
  ||   ||||||| |||||| ||||  ||||     |||      ||||  
  CC   UUACAGA GGGCCA CUac  uuaa     cuc      gaaa c
CA  UAC       U      -    -a    ----u   uaacuu    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-36-5p

• Accession: MIMAT0035258
• Description: Gyrodactylus salaris gsa-miR-36-5p mature miRNA
• Sequence: 1 - GGCUUGAUGUUUCUCCGGU - 19
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-36-3p

• Accession: MIMAT0035259
• Description: Gyrodactylus salaris gsa-miR-36-3p mature miRNA
• Sequence: 73 - UCACCGGGUAGACAUUCAUCCAC - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628