Stem-loop gsa-mir-96a

Accession

MI0028947

Description

Gyrodactylus salaris gsa-mir-96a precursor miRNA

Sequence

CUUGGCACUCUAGGAAUCGUCUCuaacagaauaauuaacccauuuauuugaGACGGACCGAGUGUGCUAAACA
.(((((((.((.((..(((((((.....((((((.........))))))))))))).)).)).)))))))...

Structure

--C       U  A  AA       uaaca      uua 
   UUGGCAC CU GG  UCGUCUC     gaauaa   a
   ||||||| || ||  |||||||     ||||||   c
   AAUCGUG GA CC  GGCAGag     uuuauu   c
ACA       U  G  -A       -----      uac 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-96a-5p

• Accession: MIMAT0035256
• Description: Gyrodactylus salaris gsa-miR-96a-5p mature miRNA
• Sequence: 1 - CUUGGCACUCUAGGAAUCGUCUC - 23
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-96a-3p

• Accession: MIMAT0035257
• Description: Gyrodactylus salaris gsa-miR-96a-3p mature miRNA
• Sequence: 52 - GACGGACCGAGUGUGCUAAACA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628