Stem-loop gsa-mir-1175

Accession

MI0028946

Description

Gyrodactylus salaris gsa-mir-1175 precursor miRNA

Sequence

GUCGGAAAGUUGAAUAUCGAAuuguucacgauuucucuuauuuUGAGAUUCAACUUCUUCGACUGA
(((((((((((((((.(((((....................))))).))))))))).))))))...

Structure

---      -         A     uuguucacg 
   GUCGGA AAGUUGAAU UCGAA         a
   |||||| ||||||||| |||||          
   CAGCUU UUCAACUUA AGUuu         u
AGU      C         G     uauucucuu 

Annotation confidence Low

Genome context

Unknown

Mature gsa-miR-1175-5p

• Accession: MIMAT0035254
• Description: Gyrodactylus salaris gsa-miR-1175-5p mature miRNA
• Sequence: 1 - GUCGGAAAGUUGAAUAUCGAA - 21
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-1175-3p

• Accession: MIMAT0035255
• Description: Gyrodactylus salaris gsa-miR-1175-3p mature miRNA
• Sequence: 44 - UGAGAUUCAACUUCUUCGACUGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628