Stem-loop gsa-mir-190

Accession

MI0028945

Description

Gyrodactylus salaris gsa-mir-190 precursor miRNA

Sequence

UGAUAUGUUUGGGUUACAAGGUGguguguaucugcaaauucuguuugaaaucaUCUAGUAACAAAACAUAUCUGU
.(((((((((..(((((.(((((((........(((.....))).....))))))).))))).)))))))))...

Structure

--U         GG     A       guguaucu   a 
   GAUAUGUUU  GUUAC AGGUGgu        gca a
   |||||||||  ||||| |||||||        ||| u
   CUAUACAAA  CAAUG UCUacua        ugu u
UGU         -A     A       ---aaguu   c 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-190-5p

• Accession: MIMAT0035252
• Description: Gyrodactylus salaris gsa-miR-190-5p mature miRNA
• Sequence: 1 - UGAUAUGUUUGGGUUACAAGGUG - 23
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-190-3p

• Accession: MIMAT0035253
• Description: Gyrodactylus salaris gsa-miR-190-3p mature miRNA
• Sequence: 54 - UCUAGUAACAAAACAUAUCUGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628