Stem-loop gsa-mir-279

Accession

MI0028941

Description

Gyrodactylus salaris gsa-mir-279 precursor miRNA

Sequence

AGUGAGUGAUAUUCUAUUCCAUGaucuagauucaUGACUAGAAUGAGCACUCACGCC
.(((((((.(((((((.((.((((.......)))))).)))))))..)))))))...

Structure

--A       -A       U  C    uc 
   GUGAGUG  UAUUCUA UC AUGa  u
   |||||||  ||||||| || ||||  a
   CACUCAC  GUAAGAU AG Uacu  g
CCG       GA       C  -    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature gsa-miR-279-5p

• Accession: MIMAT0035244
• Description: Gyrodactylus salaris gsa-miR-279-5p mature miRNA
• Sequence: 1 - AGUGAGUGAUAUUCUAUUCCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature gsa-miR-279-3p

• Accession: MIMAT0035245
• Description: Gyrodactylus salaris gsa-miR-279-3p mature miRNA
• Sequence: 35 - UGACUAGAAUGAGCACUCACGCC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24025793
   Substantial loss of conserved and gain of novel MicroRNA families in flatworms
   "Fromm B, Worren MM, Hahn C, Hovig E, Bachmann L"
   "Mol Biol Evol (2013) 30:2619-2628