Stem-loop efu-mir-142

Accession

MI0028917

Description

Eptesicus fuscus efu-mir-142 precursor miRNA

Sequence

375 reads, 17.0 reads per million, 8 experiments

ugcagucaccCAUAAAGUAGAAAGCACUACUAacagcacuggagggUGUAGUGUUUCCUACUUUAUGGAugaguguacu
((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).))))..

Structure

--    g   c           A         UAa ag a 
  ugca uca cCAUAAAGUAG AAGCACUAC   c  c c
  |||| ||| ||||||||||| |||||||||   |  |  
  augu agu GGUAUUUCAUC UUUGUGAUG   g  g u
uc    g   A           C         -Ug ga g 

Annotation confidence High

Genome context

JH977654.1: 617361-617439 [+]

Mature efu-miR-142-5p

• Accession: MIMAT0058930
• Description: Eptesicus fuscus efu-miR-142-5p mature miRNA
• Sequence: 11 - CAUAAAGUAGAAAGCACUACUA - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-142-3p

• Accession: MIMAT0035200
• Description: Eptesicus fuscus efu-miR-142-3p mature miRNA
• Sequence: 47 - UGUAGUGUUUCCUACUUUAUGGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545