Stem-loop efu-mir-126

Accession

MI0028878

Description

Eptesicus fuscus efu-mir-126 precursor miRNA

Sequence

45754 reads, 623.0 reads per million, 8 experiments

ggcgacgggaCAUUAUUACUUUUGGUACGCGcugugacacuucaaaCUCGUACCGUGAGUAAUAAUGCGccgucggcag
(.((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..)))))).)..

Structure

-- g      ga           U       CGcug   c 
  g cgacgg  CAUUAUUACUU UGGUACG     uga a
  | ||||||  ||||||||||| |||||||     |||  
  c gcugcc  GUAAUAAUGAG GCCAUGC     acu c
ga g      GC           U       -UCaa   u 

Annotation confidence High

Genome context

JH977690.1: 1315382-1315460 [+]

Mature efu-miR-126-5p

• Accession: MIMAT0058913
• Description: Eptesicus fuscus efu-miR-126-5p mature miRNA
• Sequence: 11 - CAUUAUUACUUUUGGUACGCG - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-126-3p

• Accession: MIMAT0035169
• Description: Eptesicus fuscus efu-miR-126-3p mature miRNA
• Sequence: 47 - CUCGUACCGUGAGUAAUAAUGCG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545