Stem-loop efu-mir-9186b-3

Accession

MI0028837

Description

Eptesicus fuscus efu-mir-9186b-3 precursor miRNA

Sequence

81613 reads, 2336.0 reads per million, 6 experiments

agggggaggUUGGCGGUAUCACUGGUACUGagguaauggcuguccacAGUACCAGACAUGCCGCCCUCcucccccuac
(((((((((..((((((((..(((((((((.((..........)).)))))))))..))))))))..)))))))))..

Structure

--         UU        CA         a  uaau 
  agggggagg  GGCGGUAU  CUGGUACUG gg    g
  |||||||||  ||||||||  ||||||||| ||     
  ucccccucC  CCGCCGUA  GACCAUGAc cc    g
ca         UC        CA         a  uguc 

Annotation confidence High

Genome context

JH977753.1: 67063-67140 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9186b-3

Mature efu-miR-9186b-5p

• Accession: MIMAT0058814
• Description: Eptesicus fuscus efu-miR-9186b-5p mature miRNA
• Sequence: 10 - UUGGCGGUAUCACUGGUACUG - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186b-3p

• Accession: MIMAT0035022
• Description: Eptesicus fuscus efu-miR-9186b-3p mature miRNA
• Sequence: 48 - AGUACCAGACAUGCCGCCCUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545