Stem-loop efu-mir-124-1

Accession

MI0028833

Description

Eptesicus fuscus efu-mir-124-1 precursor miRNA

Sequence

249 reads, 32.0 reads per million, 2 experiments

ccucucucucCGUGUUCACAGCGGACCUUGAUuuaaauguccauacaaUUAAGGCACGCGGUGAAUGCCAAgaauggggcu
((((..(((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))..))))..

Structure

--    uc   cC        A   GA        uaaau 
  ccuc  ucu  GUGUUCAC GCG  CCUUGAUu     g
  ||||  |||  |||||||| |||  ||||||||     u
  gggg  agA  CGUAAGUG CGC  GGAAUUaa     c
uc    ua   AC        G   AC        cauac 

Annotation confidence High

Genome context

JH977673.1: 6971615-6971695 [-]

Mature efu-miR-124-5p

• Accession: MIMAT0058882
• Description: Eptesicus fuscus efu-miR-124-5p mature miRNA
• Sequence: 11 - CGUGUUCACAGCGGACCUUGAU - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-124-3p

• Accession: MIMAT0035131
• Description: Eptesicus fuscus efu-miR-124-3p mature miRNA
• Sequence: 49 - UUAAGGCACGCGGUGAAUGCCAA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545