Stem-loop efu-mir-199-3

Accession

MI0028825

Description

Eptesicus fuscus efu-mir-199-3 precursor miRNA

Sequence

26601 reads, 592.0 reads per million, 8 experiments

acuccgucuaCCCAGUGUUUAGACUAUCUGUUCAGgacucccaaauugUACAGUAGUCUGCACAUUGGUUAggcuggcugg
...(((((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).))))).))....

Structure

-acu  -     C       U       U    U   gacu 
    cc gucua CCAGUGU UAGACUA CUGU CAG    c
    || ||||| ||||||| ||||||| |||| |||     
    gg cggAU GGUUACA GUCUGAU GACA guu    c
gguc  u     U       C       -    U   aaac 

Annotation confidence High

Genome context

JH977690.1: 5464428-5464508 [+]

Mature efu-miR-199-3-5p

• Accession: MIMAT0058772
• Description: Eptesicus fuscus efu-miR-199-3-5p mature miRNA
• Sequence: 11 - CCCAGUGUUUAGACUAUCUGUUCAG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-199-3p

• Accession: MIMAT0034946
• Description: Eptesicus fuscus efu-miR-199-3p mature miRNA
• Sequence: 49 - UACAGUAGUCUGCACAUUGGUUA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545