Stem-loop efu-mir-9186f-3

Accession

MI0028813

Description

Eptesicus fuscus efu-mir-9186f-3 precursor miRNA

Sequence

20224 reads, 1107.0 reads per million, 4 experiments

uagggggagggAGGAGGCAUGGCUGGUAGUAUGuuaauagcuguccAUACUGCCAGACAUGCCACCUUUCucacccuaca
(((((.((((((((.((((((.(((((((((((............))))))))))).)))))).)))))))).)))))..

Structure

--     g        A      G           uuaau 
  uaggg gagggAGG GGCAUG CUGGUAGUAUG     a
  ||||| |||||||| |||||| |||||||||||      
  auccc cuCUUUCC CCGUAC GACCGUCAUAc     g
ac     a        A      A           cuguc 

Annotation confidence High

Genome context

JH977753.1: 8086-8165 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from efu-mir-9186f-3

Mature efu-miR-9186f-5p

• Accession: MIMAT0058750
• Description: Eptesicus fuscus efu-miR-9186f-5p mature miRNA
• Sequence: 12 - AGGAGGCAUGGCUGGUAGUAUG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186f-3p

• Accession: MIMAT0034908
• Description: Eptesicus fuscus efu-miR-9186f-3p mature miRNA
• Sequence: 47 - AUACUGCCAGACAUGCCACCUUUC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545