Stem-loop efu-mir-22

Accession

MI0028812

Description

Eptesicus fuscus efu-mir-22 precursor miRNA

Sequence

6382469 reads, 60785.0 reads per million, 8 experiments

cugagccgcaguAGUUCUUCAGUGGCAAGCUUUAuguccugacccagcuAAAGCUGCCAGUUGAAGAACUGUUGcccucugccg
..(((..((((((((((((((((((((.((((((.((.........))))))))))))).))))))))))))))).))).....

Structure

---cu   cc               -     A      u  ccu 
     gag  gcaguAGUUCUUCAG UGGCA GCUUUA gu   g
     |||  ||||||||||||||| ||||| |||||| ||   a
     cuc  cGUUGUCAAGAAGUU ACCGU CGAAAu cg   c
gccgu   -c               G     -      -  acc 

Annotation confidence High

Genome context

JH977654.1: 11019124-11019207 [-]

Mature efu-miR-22-5p

• Accession: MIMAT0058874
• Description: Eptesicus fuscus efu-miR-22-5p mature miRNA
• Sequence: 13 - AGUUCUUCAGUGGCAAGCUUUA - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-22-3p

• Accession: MIMAT0035115
• Description: Eptesicus fuscus efu-miR-22-3p mature miRNA
• Sequence: 50 - AAAGCUGCCAGUUGAAGAACUGUUG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545