Stem-loop efu-mir-9186b-5

Accession

MI0028800

Description

Eptesicus fuscus efu-mir-9186b-5 precursor miRNA

Sequence

79138 reads, 3313.0 reads per million, 7 experiments

agggggaggUGAGCGGCAUCACUGGUACUGAgguaauggcugcucacAGUACCAGACAUGCCGCCCUCcucccccuac
(((((((((.(.(((((((..(((((((((.((((.....))))..)))))))))..))))))).).)))))))))..

Structure

--         U A       CA         -A    a 
  agggggagg G GCGGCAU  CUGGUACUG  ggua u
  ||||||||| | |||||||  |||||||||  |||| g
  ucccccucC C CGCCGUA  GACCAUGAc  ucgu g
ca         U C       CA         ac    c 

Annotation confidence High

Genome context

JH977753.1: 163900-163977 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from efu-mir-9186b-5

Mature efu-miR-9186b-5p

• Accession: MIMAT0058814
• Description: Eptesicus fuscus efu-miR-9186b-5p mature miRNA
• Sequence: 10 - UGAGCGGCAUCACUGGUACUGA - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186b-3p

• Accession: MIMAT0035022
• Description: Eptesicus fuscus efu-miR-9186b-3p mature miRNA
• Sequence: 48 - AGUACCAGACAUGCCGCCCUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545