Stem-loop efu-mir-9186k

Accession

MI0028754

Description

Eptesicus fuscus efu-mir-9186k precursor miRNA

Sequence

43873 reads, 1368.0 reads per million, 6 experiments

guagggggagGUUGGCGGUAUCACUGGUACUGUGGuaauggcugccagcAGUACCAGACAUGCCGCCccucucccccuacaa
(((((((((((..((((((((..((((((((((((((.....))))).)))))))))..))))))))..)))))))))))..

Structure

--           UU        CA         -     a 
  guagggggagG  GGCGGUAU  CUGGUACUG UGGua u
  |||||||||||  ||||||||  ||||||||| ||||| g
  caucccccucu  CCGCCGUA  GACCAUGAc accgu g
aa           cc        CA         g     c 

Annotation confidence Medium

Genome context

JH979090.1: 2218-2299 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9186k

Mature efu-miR-9186k-5p

• Accession: MIMAT0035067
• Description: Eptesicus fuscus efu-miR-9186k-5p mature miRNA
• Sequence: 11 - GUUGGCGGUAUCACUGGUACUGUGG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186k-3p

• Accession: MIMAT0058846
• Description: Eptesicus fuscus efu-miR-9186k-3p mature miRNA
• Sequence: 50 - AGUACCAGACAUGCCGCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545