Stem-loop efu-mir-9318a

Accession

MI0028688

Description

Eptesicus fuscus efu-mir-9318a precursor miRNA

Sequence

22654 reads, 1638.0 reads per million, 2 experiments

ucacccccaguguUGACAGUGUGUGUGUCCccaucggggaggucacgcaUCUCUGACAUGUACUGGcaugugca
.(((..((((((.((.((((((((((.(((((...))))).).))))))...))).))..))))))...)))..

Structure

-u   -cc      -u  A   ---      - G     a 
  cac   ccagug  UG CAG   UGUGUG U UCCcc  
  |||   ||||||  || |||   |||||| | ||||| u
  gug   GGUCAU  AC GUC   acgcac g agggg  
ac   uac      GU  A   UCU      u g     c 

Annotation confidence Low

Genome context

JH977707.1: 2837380-2837453 [+]

Mature efu-miR-9318a-5p

• Accession: MIMAT0035003
• Description: Eptesicus fuscus efu-miR-9318a-5p mature miRNA
• Sequence: 14 - UGACAGUGUGUGUGUCC - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9318a-3p

• Accession: MIMAT0058801
• Description: Eptesicus fuscus efu-miR-9318a-3p mature miRNA
• Sequence: 50 - UCUCUGACAUGUACUGG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545