Stem-loop efu-mir-92c

Accession

MI0028683

Description

Eptesicus fuscus efu-mir-92c precursor miRNA

Sequence

3021540 reads, 27630.0 reads per million, 8 experiments

cuuucuacacAGGUUGGGAUCAGUUGCAAUGCUguguuucuguauggUAUUGCACUUGUCCCGGCCUGUugaguuuggu
....((..((((((((((((.(((.(((((((((((......)))))))))))))).))))))))))))..))......

Structure

--cuuu  ac            C   U           uu 
      cu  acAGGUUGGGAU AGU GCAAUGCUgug  u
      ||  |||||||||||| ||| |||||||||||   
      ga  UGUCCGGCCCUG UCA CGUUAUgguau  c
ugguuu  gu            U   -           gu 

Annotation confidence High

Genome context

JH977750.1: 96157-96235 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from efu-mir-92c

Mature efu-miR-92c-5p

• Accession: MIMAT0034998
• Description: Eptesicus fuscus efu-miR-92c-5p mature miRNA
• Sequence: 11 - AGGUUGGGAUCAGUUGCAAUGCU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-92c-3p

• Accession: MIMAT0058796
• Description: Eptesicus fuscus efu-miR-92c-3p mature miRNA
• Sequence: 48 - UAUUGCACUUGUCCCGGCCUGU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545