Stem-loop efu-mir-130

Accession

MI0028677

Description

Eptesicus fuscus efu-mir-130 precursor miRNA

Sequence

71469 reads, 643.0 reads per million, 8 experiments

gcugcaggccggaGCUCUUUUCACAUUGUGCUACUgucugcaccuaccacuagCAGUGCAAUGUUAAAAGGGCAUUGGccguguagug
((((((((((((.((((((((.((((((((((.(((..............))).)))))))))).)))))))).)))))).)))))).

Structure

-      -      a        C          A   ucugca 
 gcugca ggccgg GCUCUUUU ACAUUGUGCU CUg      c
 |||||| |||||| |||||||| |||||||||| |||       
 ugaugu ccGGUU CGGGAAAA UGUAACGUGA gau      c
g      g      A        U          C   caccau 

Annotation confidence Medium

Genome context

JH977834.1: 908977-909064 [+]

Mature efu-miR-130-5p

• Accession: MIMAT0058792
• Description: Eptesicus fuscus efu-miR-130-5p mature miRNA
• Sequence: 14 - GCUCUUUUCACAUUGUGCUACU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-130-3p

• Accession: MIMAT0034992
• Description: Eptesicus fuscus efu-miR-130-3p mature miRNA
• Sequence: 54 - CAGUGCAAUGUUAAAAGGGCAUUGG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545