Stem-loop efu-mir-9313

Accession

MI0028673

Description

Eptesicus fuscus efu-mir-9313 precursor miRNA

Sequence

194 reads, 5.0 reads per million, 8 experiments

gggucccaggUUUGGGGGUUGAUUGGAACCAGCcaguaugaugagcUGUACUUCCUUCUUUACCCCCAGgcuguggcugcaa
.((((...(((((((((((.....((((.((((((......)).))))...))))......)))))))))))..))))....

Structure

---g    cca           -UGAUU    --C    -  gu 
    gguc   ggUUUGGGGGU      GGAA   CAGC ca  a
    ||||   |||||||||||      ||||   |||| ||   
    ucgg   ucgGACCCCCA      CCUU   GUcg gu  u
aacg    -ug           UUUCUU    CAU    a  ag 

Annotation confidence Medium

Genome context

JH977617.1: 23696320-23696401 [-]

Mature efu-miR-9313-5p

• Accession: MIMAT0034988
• Description: Eptesicus fuscus efu-miR-9313-5p mature miRNA
• Sequence: 11 - UUUGGGGGUUGAUUGGAACCAGC - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9313-3p

• Accession: MIMAT0058790
• Description: Eptesicus fuscus efu-miR-9313-3p mature miRNA
• Sequence: 47 - UGUACUUCCUUCUUUACCCCCAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545