Stem-loop efu-mir-28

Accession

MI0028634

Description

Eptesicus fuscus efu-mir-28 precursor miRNA

Sequence

457088 reads, 4098.0 reads per million, 8 experiments

ccuugcccucAAGGAGCUCACAGUCUAUUGAGUugccuuucugauuucccCACUAGAUUGUGAGCUCCUGGAgggcaggcac
.(((((((((.((((((((((((((((.((....................)).)))))))))))))))).)))))))))...

Structure

--c         A                U  AGUugccuu 
   cuugcccuc AGGAGCUCACAGUCUA UG         u
   ||||||||| |||||||||||||||| ||          
   ggacgggAG UCCUCGAGUGUUAGAU AC         c
cac         G                C  cccuuuagu 

Annotation confidence High

Genome context

JH977679.1: 1811831-1811912 [+]

Mature efu-miR-28-5p

• Accession: MIMAT0034949
• Description: Eptesicus fuscus efu-miR-28-5p mature miRNA
• Sequence: 11 - AAGGAGCUCACAGUCUAUUGAGU - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-28-3p

• Accession: MIMAT0058774
• Description: Eptesicus fuscus efu-miR-28-3p mature miRNA
• Sequence: 51 - CACUAGAUUGUGAGCUCCUGGA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545