Stem-loop efu-mir-199-2

Accession

MI0028631

Description

Eptesicus fuscus efu-mir-199-2 precursor miRNA

Sequence

27697 reads, 657.0 reads per million, 8 experiments

gccccgccaaCCCAGUGUUCAGACUACCUGUUCAGggggcucugaaugugUACAGUAGUCUGCACAUUGGUUAggcugggcuu
((((.(((...(((((((.((((((((.((((((((....)))))......))))))))))).)))))))...))).))))..

Structure

--    c   aaC       U        C   ------     g 
  gccc gcc   CCAGUGU CAGACUAC UGU      UCAGg g
  |||| |||   ||||||| |||||||| |||      |||||  
  cggg cgg   GGUUACA GUCUGAUG ACA      agucu g
uu    u   AUU       C        -   Ugugua     c 

Annotation confidence High

Genome context

JH977791.1: 1080038-1080120 [+]

Mature efu-miR-199-5p

• Accession: MIMAT0058771
• Description: Eptesicus fuscus efu-miR-199-5p mature miRNA
• Sequence: 11 - CCCAGUGUUCAGACUACCUGUUCAG - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-199-3p

• Accession: MIMAT0034946
• Description: Eptesicus fuscus efu-miR-199-3p mature miRNA
• Sequence: 51 - UACAGUAGUCUGCACAUUGGUUA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545