Stem-loop efu-mir-9288

Accession

MI0028630

Description

Eptesicus fuscus efu-mir-9288 precursor miRNA

Sequence

cuguagaggaCACCAUGUUUUCGUGUUGUCUCCCCgugugccgagaccgaggccucaagagaggcagcgaugagaguagguuccgacgugcccg
..(((..(((.(((.(((((((((((((((((....((.(((........)))..))...)))))))).)))))))))))))))....)))...

Structure

-cu   --ga   C   A         -        CCCg  -u   gag 
   gua    gga ACC UGUUUUCGU GUUGUCUC    ug  gcc   a
   |||    ||| ||| ||||||||| ||||||||    ||  |||    
   cgu    ccu ugg augagagua cgacggag    ac  cgg   c
gcc   gcag   -   -         g        -aga  uc   agc 

Annotation confidence Not enough data

Genome context

JH977639.1: 6583569-6583662 [-]

Mature efu-miR-9288

• Accession: MIMAT0034945
• Description: Eptesicus fuscus efu-miR-9288 mature miRNA
• Sequence: 11 - CACCAUGUUUUCGUGUUGUCUCCCC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545