Stem-loop efu-mir-9279a-1

Accession

MI0028602

Description

Eptesicus fuscus efu-mir-9279a-1 precursor miRNA

Sequence

2854 reads, 60.0 reads per million, 8 experiments

gucugggagaggccacgcgcCCCUGGGUCCGGGUGAGgccauguguccCUGGAUCCGGGUGAGGCCUugcgcaccuag
...((.(.((((((...(((((..(((((((((.((.((...)).)))))))))))))))).)))))).).)).....

Structure

--guc  g a      acg     CU         U  G  c 
     ug g gaggcc   cgcCC  GGGUCCGGG GA gc  
     || | ||||||   |||||  ||||||||| || || a
     ac c uUCCGG   GUGGG  CCUAGGUCc cu ug  
gaucc  g g      --A     --         -  g  u 

Annotation confidence Low

Genome context

JH977615.1: 15682697-15682774 [+]

Mature efu-miR-9279a-5p

• Accession: MIMAT0058755
• Description: Eptesicus fuscus efu-miR-9279a-5p mature miRNA
• Sequence: 21 - CCCUGGGUCCGGGUGAG - 37
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9279a-3p

• Accession: MIMAT0034917
• Description: Eptesicus fuscus efu-miR-9279a-3p mature miRNA
• Sequence: 49 - CUGGAUCCGGGUGAGGCCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545