miRBase entry: efu-mir-9229e-2

Stem-loop efu-mir-9229e-2


Accession
MI0028519
Description
Eptesicus fuscus efu-mir-9229e-2 precursor miRNA


Sequence

328 reads, 17.0 reads per million, 5 experiments
guuuUGGUGCUCACUGAGUCUGCCcuuugagugugucacuuauggauguguagaguuauaaucugguauggucugaagcugu
(((((((..(..(((((.(((((((..((((((...)))))).))....))))).)).......)))..)..)))))))...

Structure
---       UG UC   -------  G     ----  uu      u 
   guuuUGG  C  ACU       GA UCUGC    Cc  ugagug  
   |||||||  |  |||       || |||||    ||  |||||| g
   cgaaguc  g  ugg       uu agaug    gg  auucac  
ugu       ug ua   ucuaaua  g     ugua  -u      u 


Annotation confidence Not enough data
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Genome context
JH977754.1: 847456-847537 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9229e-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9229e-5p

Accession MIMAT0034846
Description Eptesicus fuscus efu-miR-9229e-5p mature miRNA
Sequence 5 - UGGUGCUCACUGAGUCUGCC - 24
Evidence experimental
Illumina [1]

Mature efu-miR-9229e-2-5p

Accession MIMAT0058731
Description Eptesicus fuscus efu-miR-9229e-2-5p mature miRNA
Sequence 5 - UGGUGCUCACUGAGUCUGCC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545