Stem-loop efu-mir-9209d

Accession

MI0028460

Description

Eptesicus fuscus efu-mir-9209d precursor miRNA

Sequence

288 reads, 7.0 reads per million, 8 experiments

aguaUAGAACAGUGGUCGGCAAACCGUGGcucgcuagccacaugcggcucgccagccgugauUUGCCGCUCUGUUGACUAAuga
.......(((((.((.(((((((.(((((((.((.((((......)))).)).))))))).)))))))))))))).........

Structure

--aguaUAG     U  U       C       c  u    ac 
         AACAG GG CGGCAAA CGUGGcu gc agcc  a
         ||||| || ||||||| ||||||| || ||||   
         UUGUC UC GCCGUUu gugccga cg ucgg  u
aguAAUCAG     -  -       a       c  c    cg 

Annotation confidence Low

Genome context

JH977712.1: 4489119-4489202 [-]

Mature efu-miR-9209d-5p

• Accession: MIMAT0058712
• Description: Eptesicus fuscus efu-miR-9209d-5p mature miRNA
• Sequence: 5 - UAGAACAGUGGUCGGCAAACCGUGG - 29
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9209d-3p

• Accession: MIMAT0034797
• Description: Eptesicus fuscus efu-miR-9209d-3p mature miRNA
• Sequence: 63 - UUGCCGCUCUGUUGACUAA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545