Stem-loop efu-mir-9201a-5

Accession

MI0028450

Description

Eptesicus fuscus efu-mir-9201a-5 precursor miRNA

Sequence

49 reads, 1.0 reads per million, 8 experiments

agagaggcucagAGAGAGGCAGGGUCUGAUCugcagccuccaugcagcuguuaAUCAGCUGUUGCCUCUCUCUUUcucuccaggc
.((((((...((((((((((((.(.(((((..(((((.........)))))..))))).).)))))))))))).)))))).....

Structure

----a      cuc            G U     Cu     cuc 
     gagagg   agAGAGAGGCAG G CUGAU  gcagc   c
     ||||||   |||||||||||| | |||||  |||||   a
     cucucU   UCUCUCUCCGUU U GACUA  ugucg   u
cggac      --U            G C     au     acg 

Annotation confidence Not enough data

Genome context

JH977662.1: 824076-824160 [-]

Mature efu-miR-9201a-5p

• Accession: MIMAT0058709
• Description: Eptesicus fuscus efu-miR-9201a-5p mature miRNA
• Sequence: 13 - AGAGAGGCAGGGUCUGAUC - 31
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9201a-3p

• Accession: MIMAT0034785
• Description: Eptesicus fuscus efu-miR-9201a-3p mature miRNA
• Sequence: 54 - AUCAGCUGUUGCCUCUCUCUUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545