Stem-loop efu-mir-9200b

Accession

MI0028446

Description

Eptesicus fuscus efu-mir-9200b precursor miRNA

Sequence

1052 reads, 12.0 reads per million, 8 experiments

cgcugacugcCACGGGGGCUGUGGAUCAGACUcugcuucucucucuggGCCUGAUCCGCAGCCCCUuccacagucagugac
(((((((((....((((((((((((((((.(((.............))).))))))))))))))))....)))))))))..

Structure

--         cCAC                A   ugcuu 
  cgcugacug    GGGGGCUGUGGAUCAG CUc     c
  |||||||||    |||||||||||||||| |||     u
  gugacugac    UCCCCGACGCCUAGUC Ggg     c
ca         accu                C   ucucu 

Annotation confidence Medium

Genome context

JH977615.1: 30678694-30678774 [-]

Mature efu-miR-9200b-5p

• Accession: MIMAT0034786
• Description: Eptesicus fuscus efu-miR-9200b-5p mature miRNA
• Sequence: 11 - CACGGGGGCUGUGGAUCAGACU - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9200b-3p

• Accession: MIMAT0058710
• Description: Eptesicus fuscus efu-miR-9200b-3p mature miRNA
• Sequence: 49 - GCCUGAUCCGCAGCCCCU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545