Stem-loop efu-mir-9188a

Accession

MI0028419

Description

Eptesicus fuscus efu-mir-9188a precursor miRNA

Sequence

664 reads, 7.0 reads per million, 8 experiments

gggagcugggugcCUGUCCUCUGGUGCACCAGGCcuucuaaaaggccuggugccggagCGGACAGGCACCCAGCUCCCcc
(((((((((((((((((((.((...((((((((((((....))))))))))))...)).)))))))))))))))))))..

Structure

--                   U  GGU            c 
  gggagcugggugcCUGUCC CU   GCACCAGGCcuu u
  ||||||||||||||||||| ||   ||||||||||||  
  CCCUCGACCCACGGACAGG ga   cgugguccggaa a
cc                   C  ggc            a 

Annotation confidence Low

Genome context

JH977611.1: 16523002-16523081 [-]

Mature efu-miR-9188a-5p

• Accession: MIMAT0034768
• Description: Eptesicus fuscus efu-miR-9188a-5p mature miRNA
• Sequence: 14 - CUGUCCUCUGGUGCACCAGGC - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9188a-3p

• Accession: MIMAT0058705
• Description: Eptesicus fuscus efu-miR-9188a-3p mature miRNA
• Sequence: 59 - CGGACAGGCACCCAGCUCCC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545