Stem-loop eca-mir-8932-2

Accession

MI0028415

Description

Equus caballus eca-mir-8932-2 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

gacacugcugcugcucucuggggagcuggccgagguggcuugcccgcgugccgggggcucuggcgccaguggcacgUGUGCUGGGAGCGCCUGAGCCgugguggccgcacgggcugcccagaggcgcccggggggcu
............((.(((((((.(((...(((..((((((...(((((.((((((.(((((.(((((........).))))..))))).)))).))))))).)))))).)))))).)))))))))((((...)))).

Structure

gacacugcugcu  u       g   ugg   ag      ugc     u  -    g     -g    - agu 
            gc cucuggg agc   ccg  guggcu   ccgcg gc cggg gcucu  gcgc c   g
            || ||||||| |||   |||  ||||||   ||||| || |||| |||||  |||| |    
            cg gagaccc ucg   ggc  cgccgg   ggugC CG GUCC CGAGG  CGUG g   g
ucggggggcccg  -       g   ---   -a      --u     -  A    G     GU    U cac 

Annotation confidence Not enough data

Genome context

chr18: 3400812-3400948 [+]

Mature eca-miR-8932

• Accession: MIMAT0034460
• Description: Equus caballus eca-miR-8932 mature miRNA
• Sequence: 77 - UGUGCUGGGAGCGCCUGAGCC - 97
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545