Stem-loop eca-mir-9182

Accession

MI0028412

Description

Equus caballus eca-mir-9182 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

acugauggugcuacuuugaacugcuuuucuuuucuccuuuUUGCACAAAGAGUCUCAUGUCUgauauuuagacaugaugagcuuugugcaaaaggggaccugguuacugcuugcucugcuucaucccacucuuauucug
...(((((.((......(....((....((....((((((((((((((((..((((((((((((...)))))))))).)).))))))))))))))))....)).....))...)...)).)))))..............

Structure

-----------acu     u  uacuuu aacu  -uuuu  uuuc                AG  -          u 
              gaugg gc      g    gc     cu    uccuuuUUGCACAAAG  UC UCAUGUCUga  
              ||||| ||      |    ||     ||    ||||||||||||||||  || |||||||||| a
              cuacu cg      c    cg     gg    ggggaaaacguguuuc  ag aguacagauu  
gucuuauucucacc     u  ---ucu -guu  ucauu  ucca                -g  u          u 

Annotation confidence Not enough data

Genome context

chr18: 65487257-65487395 [+]

Mature eca-miR-9182

• Accession: MIMAT0034763
• Description: Equus caballus eca-miR-9182 mature miRNA
• Sequence: 41 - UUGCACAAAGAGUCUCAUGUCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545