Stem-loop eca-mir-9165

Accession

MI0028390

Description

Equus caballus eca-mir-9165 precursor miRNA

Sequence

1 reads, 0 reads per million, 1 experiments

ccguccuggccccggcaccgUGCGCUCGGCUCUCUGUGGCACCagagccgugccaggagggccacggagcgcgugugucgcuguguggacguauuuggcug
.(((((..((..((((((..(((((((((((((((.((((((.......))))))))))))))...))))))).))))))..))..)))))..........

Structure

---------c     ug  cc      cg       ---        G      Ca 
          cgucc  gc  cggcac  UGCGCUC   GGCUCUCU UGGCAC  g
          |||||  ||  ||||||  |||||||   |||||||| ||||||  a
          gcagg  ug  gcugug  gcgcgag   ccgggagg accgug  g
gucgguuuau     ug  uc      -u       gca        -      cc 

Annotation confidence Not enough data

Genome context

chr17: 79797998-79798098 [+]

Mature eca-miR-9165

• Accession: MIMAT0034743
• Description: Equus caballus eca-miR-9165 mature miRNA
• Sequence: 21 - UGCGCUCGGCUCUCUGUGGCACC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545