Stem-loop eca-mir-9160

Accession

MI0028384

Description

Equus caballus eca-mir-9160 precursor miRNA

Sequence

2 reads, 0 reads per million, 1 experiments

uuuguucucuccauucccucuuugaccaaggucauacauaagcacgauaacaggcucuuggaaaacuagaucaguuuUCCAAGAGCCUGUUAUCGUGCUuauguacuaacaccauccuagacccuauggucaauagaaa
..................((((((((((.((((.(((((((((((((((((((((((((((((((((.....)))))))))))))))))))))))))))))))))..............))))...))))))).)))..

Structure

uuuguucucuccauuccc   -       --a    -------------a                                 a 
                  ucu uugacca   gguc              uacauaagcacgauaacaggcucuuggaaaacu g
                  ||| |||||||   ||||              ||||||||||||||||||||||||||||||||| a
                  aga aacuggu   ccag              auguauUCGUGCUAUUGUCCGAGAACCUuuuga u
----------------aa   u       auc    auccuaccacaauc                                 c 

Annotation confidence Not enough data

Genome context

chr14: 47959181-47959319 [-]

Mature eca-miR-9160

• Accession: MIMAT0034737
• Description: Equus caballus eca-miR-9160 mature miRNA
• Sequence: 78 - UCCAAGAGCCUGUUAUCGUGCU - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545