miRBase entry: eca-mir-9155

Stem-loop eca-mir-9155


Accession
MI0028378
Description
Equus caballus eca-mir-9155 precursor miRNA


Sequence

43 reads, 1.0 reads per million, 13 experiments
aaagcuuacuaacuuaaagcaacaaugacucauucUCCAUGCUUCUGUAGGUCGGCGGgguggcuccucugcugcuucugccugaacucaaaaugcuggaugcuggagggucaguuggguuggaagguccc
...((((.((((((.....((((..(((((....(((((.((.(((((((((((((((((((((......))))).)))))).).))).....))).))).)))))))))))))))))))))).))))...

Structure
aaa    a      uaaag    aa     cauu     U  U   -   -----   - -      -     uc 
   gcuu cuaacu     caac  ugacu    cUCCA GC UCU GUA     GGU C GGCGGg guggc  c
   |||| ||||||     ||||  |||||    ||||| || ||| |||     ||| | |||||| |||||   
   ugga gguugg     guug  acugg    gaggu cg agg cgu     uca g ccgucu cgucg  u
ccc    a      -----    --     ----     -  u   u   aaaac   a u      u     uc 


Annotation confidence Not enough data
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Genome context
14: 18323382-18323512 [-]

Database links

Mature eca-miR-9155-5p

Accession MIMAT0034731
Description Equus caballus eca-miR-9155-5p mature miRNA
Sequence 36 - UCCAUGCUUCUGUAGGUCGGCGG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545